MEMORANDUM OPINION
WILLIAM D. QUARLES, JR., District Judge.
Classen Immunotherapies, Inc. ("Classen") sued Biogen Idec ("Biogen") and GlaxoSmithKline ("GSK") (collectively the "defendants") for patent infringement. Pending is claim construction. On June 7, 2013, the Court held a claim construction hearing.
I. Background1
Classen is the assignee of John B. Classen, M.D. ("Dr. Classen") inventor of the patents in suit. Biogen has licensed patents "relating to recombinant hepatitis B virus vaccines." ECF No. 207 ¶ 6. GSK and its affiliates manufacture and market several vaccines, including ROTARIX, CERVARIX, BOOSTRIX, PEDIARIX, INFANRIX, and ENGERIX-B. ECF No. 211 ¶ 6.
Each of the three patents in suit is entitled "method and composition for an early vaccine to protect against both common infectious diseases and chronic immune mediated disorders or their sequelae." See ECF Nos. 219-1 to 219-3. According to the abstracts, each discloses "a method of immunization ... provided for substantially preventing or reducing the symptoms of at least one infectious disease and at least one chronic immune mediated disorder." Id. The patents have the same specification.
The '139 patent has 70 claims, and the '739 patent has 113 claims. Each has two essential steps, (I) screening two or more immunizations schedules, and (II) immunizing according to the lower risk schedule. '139 patent col. 52-53; '739 patent col. 52. The '790 patent has 213 claims and three essential steps: (I) considering the association between an immunization schedule and one or more chronic immune mediated disorders, (II) screening one or more potential recipients, and (III) immunizing according to the considerations. '790 patent col. 51.
B. Procedural History
On August 10, 2004, Classen filed suit asserting infringement of the '139, '739, and two other patents. ECF No. 1. This Court dismissed Biogen and GSK under 35 U.S.C. § 271(e)(1) and granted summary judgment for the defendants, holding that the '139 and '739 sought to patent unpatentable subject matter, see, e.g., ECF Nos. 76, 151, 152. On December 22, 2008, the Federal Circuit affirmed. ECF No. 157. However, the Supreme Court granted certiorari, vacated, and remanded to the Federal Circuit. The Federal Circuit, over Judge Moore's dissent, affirmed in part, reversed in part, vacated in part, and remanded in part, holding that Biogen and GSK were not entitled to § 271(e)(1) safe harbor and the '139 and '739 were not ineligible for patenting. ECF No. 159. On December 8, 2011, the mandate issued.
On February 3, 2012, Classen filed an amended complaint. ECF No. 172. On May 29, 2012, the Court granted GSK's motion to dismiss contributory and willful infringement claims and denied as to other claims.2 ECF No. 195. On August 9, 2012, the Court granted reconsideration but denied dismissal. ECF No. 214. On September 10, 2012, the parties filed the joint claim construction statement and opening briefs. ECF Nos. 219-221. On November 13, 2012, responsive briefs were filed. ECF Nos. 231-232.
On September 12 and 13, 2012, GSK filed requests for inter partes reexamination of the patents in suit at the Patent and Trademark Office ("PTO"). ECF Nos. 234-4 at 6, 234-6 at 5, 234-8 at 5. On October 24, November 19, and November 23, the PTO granted the reexamination requests and issued First Office Actions rejecting all the asserted claims. See ECF Nos. 234-4 to 234-9.
On February 22, 2013, the Court denied the defendants' motion to stay pending reexamination, ordered Classen to serve infringement contentions compliant with Local Rule 804.1.a for 30 claims within 15 days of the claim construction ruling, and granted the defendants' motion for leave to file supplemental invalidity contentions. ECF No. 238.
On April 1, 2013, the defendants requested additional claim construction briefing because of alleged inconsistencies between Classen's representations to the PTO during reexamination and before this Court. ECF No. 241. Classen did not oppose the request. On April 18, 2013, the Court permitted the defendants to redepose Holohan and ordered supplemental briefing. On May 14, 2013, the defendants filed supplemental briefing. ECF No. 244. On May 28, 2013, Classen filed its brief. ECF No. 249.
On June 7, 2013, the Court held a claim construction hearing. Dr. Classen, Thomas V. Holohan, M.D., and Steven N. Goodman, M.D., M.H.S., Ph.D. testified.
II. Analysis
A. Legal Standard
Claim construction is a question of law, to be determined by the Court. Markman v. Westview Instruments, Inc., 517 U.S. 370, 384, 116 S.Ct. 1384, 134 L.Ed.2d 577 (1996). Specifically, "[c]laim construction is a matter of resolution of disputed meanings and technical scope, to clarify and when necessary to explain what the patentee covered by the claims, for use in the determination of infringement. It is not an obligatory exercise in redundancy."3 Therefore, "district courts are not... required to construe every limitation present in a patent's asserted claims." O2 Micro Int'l Ltd. v. Beyond Innovation Tech. Co., 521 F.3d 1351, 1362 (Fed.Cir. 2008). For instance, terms that are "commonplace" or that "a juror can easily use [] in her infringement fact-finding without further direction from the court" need not be construed because they "are neither unfamiliar to the jury, confusing to the jury, nor affected by the specification[4] or prosecution history[5]."6
"Although a claim is not to be construed in light of the accused device, it must inevitably be construed in the context of the accused device." Pulse Med. Instruments, Inc. v. Drug Impairment Detection Servs., Inc., No. DKC 07-1388, 2009 WL 6898404, at *2 (D.Md. Mar. 20, 2009). "It is only after the claims have been construed without reference to the accused device that the claims, as so construed, are applied to the accused device to determine infringement." SRI Int'l v. Matsushita Elec. Corp. of Am., 775 F.2d 1107, 1118 (Fed.Cir.1985) (en banc) (emphasis in original).
"It is a bedrock principle of patent law that the claims of a patent define the invention to which the patentee is entitled the right to exclude."7 Thus, when construing a claim, a court should give its words their "ordinary and customary meaning" as would be understood by "a person of ordinary skill in the art in question at the time of the invention."8
"The claim should be read within the context of the entire patent, including the specification." Pulse, 2009 WL 6898404, at *2. The specification "is always highly relevant to the claim construction analysis. Usually it is dispositive; it is the single best guide to the meaning of a disputed term."9 "The specification functions as a dictionary to explain the claimed subject matter and define the terms used in the claims[, but] is to be used only to interpret words or phrases of a patent claim, not to add to, or detract from, the language of the claims."10 "In some instances, the ordinary meaning of a claim as understood by a person of skill in the art will be readily apparent from the words themselves and in those situations, general language dictionaries may be of assistance." Pulse, 2009 WL 6898404, at *2 (citing Phillips, 415 F.3d at 1314).
"In addition to consulting the specification ... a court should also consider the patent's prosecution history, if it is in evidence." Phillips, 415 F.3d at 1317 (internal quotation marks omitted). "The prosecution history limits the interpretation of claim terms so as to exclude any interpretation that was disclaimed during prosecution."11 "Yet because the prosecution history represents an ongoing negotiation between the PTO and the applicant, rather than the final product of that negotiation, it often lacks the clarity of the specification and thus is less useful for claim construction purposes." Phillips, 415 F.3d at 1317.
"In most situations, an analysis of the intrinsic evidence alone will resolve any ambiguity in a disputed claim term. In such circumstances, it is improper to rely on extrinsic evidence." Vitronics, 90 F.3d at 1583. However, extrinsic evidence, including expert and inventor testimony, dictionaries, and learned treatises,
may be helpful to explain scientific principles, the meaning of technical terms, and terms of art that appear in the patent and prosecution history. Extrinsic evidence may demonstrate the state of the prior art at the time of the invention. It is useful to show what was then old, to distinguish what was new, and to aid the court in the construction of the patent.
Markman v. Westview Instruments, Inc., 52 F.3d 967, 980 (Fed.Cir.1995) (internal quotation marks omitted), aff'd, 517 U.S. 370, 116 S.Ct. 1384, 134 L.Ed.2d 577 (1996). "In sum, extrinsic evidence may be useful to the court, but it is unlikely to result in a reliable interpretation of patent claim scope unless considered in the context of the intrinsic evidence." Phillips, 415 F.3d at 1319.
B. Claims in this Case
There are three sets of disputed claims that the Court will address in turn: (1) the "supplemental" claims whose constructions are supported by evidence from the reexamination process, (2) the original disputed claims, and (3) the "agreed" claims for which issues remain.
1. Supplemental Claims
The defendants request that the Court construe three additional claim terms because of Classen's statements at reexamination. See ECF No. 244. The defendants rely on the principle that litigants are bound by their statements at the reexamination proceedings.12 Classen has substantively opposed the defendants' arguments. ECF No. 249.
Reexamination in this case has not been completed. Courts have generally "declined to consider material from unconcluded reexamination proceedings." F5 Networks Inc. v. A10 Networks, Inc., No. 2:10-CV-00654-MJP, 2011 WL 2681182 at *4 (W.D.Wash. July 8, 2011); see also BarTex Research, LLC v. FedEx Corp., No. 6-07-CV-385, 2009 WL 5061838, at *4 (E.D.Tex. Dec. 14, 2009).
However, in Tesco Corp. v. Weatherford International, Inc., 722 F.Supp.2d 737 (S.D.Tex.2010), the court did consider reexamination materials in claim construction. See, e.g., id. at 743-44. Similarly in Beneficial Innovations, Inc. v. Blockdot, Inc., Nos. 2:07-CV-263-TJW-CE, 2:07-CV-555-TJW-CE, 2010 WL 2246291 (E.D.Tex. June 3 2010), the Court reconsidered its claim construction ruling based on reexamination arguments, relying on Tesco.13 See id. at *2.
Tesco relied on Procter & Gamble v. Kraft Foods Global, Inc., 549 F.3d 842 (Fed.Cir.2008) for the principle of looking to incomplete reexamination proceedings. Tesco, 722 F.Supp.2d at 741. Procter & Gamble, however, did not concern standard claim construction. In that case, the Federal Circuit held that the district court had abused its discretion in denying a preliminary injunction when it had "expressly refused to consider" several of the relevant factors.14 Procter & Gamble, 549 F.3d at 847. In remanding the case, the Federal Circuit stated that
the district court's consideration of the four factors [for issuance of a preliminary injunction] may require it to interpret the claims, which are presently under review by the PTO. The district court should monitor the proceedings before the PTO to ascertain whether its construction of any of the claims has been impacted by further action at the PTO or any subsequent proceedings.
Id. at 848. This is because a preliminary injunction requires a finding of likelihood of success on the merits, which, in that case, might have required some form of claim construction. See id. at 847-48. That is far from the typical claim construction process during which reexamination is pending. If claim construction were necessary for resolution of the likelihood of success on the merits factor, the analysis would have required a prospective determination of the evidence that would be presented at a proper construction and the final construction applied when the claims were addressed on the merits. Accordingly, by the time the case reached claim construction or final resolution of the case, the PTO proceedings very well could have ended; thus the reexamination materials would be proper evidence for consideration.
This case is different: typical claim construction is before the Court. The reexamination process has not been completed and development of that record there will continue. Procter & Gamble is inapplicable and Tesco is unpersuasive. This Court will follow several others in declining to consider the prosecution history of the pending reexamination. See F5 Networks, 2011 WL 2681182, at *4 (collecting cases). Because the defendants' arguments for supplemental constructions are supported nearly entirely by evidence from the reexamination, see ECF No. 244, the Court will not construe those terms.15 Similarly, the Court will not consider the defendants' evidence from reexamination in construing the disputed terms.
2. Disputed Terms
There are 15 disputed claim terms. Several issues are relevant to multiple terms, and have in various documents been grouped by the parties according to issue. However, for the sake of clarity, the Court will address the terms by number, cross-referencing prior discussions when relevant. Differences in proposed constructions will be emphasized by underlining.
a. Terms 1 and 2
Claim Language Classen's Proposed Construction16 The Defendants' Proposed
Construction
"may be identified as a lower a screened immunization schedule may be identified whether or not
risk screened immunization which is associated with a that identification is actually
schedule... with regard to the numerically lower rate of chronic made, as a screened immunization
risk of developing said chronic immune mediated disorder(s) being schedule which causes a decreased
immuneme diated disorder compared which someone net risk of acquiring all
(s)"17 may or could interpret as a real the chronic immune-mediated
risk (regardless of whether there disorders compared, such conclusion
is a statistically significant difference) based upon the appropriate
application or sound, and recognized
scientific and statistical
principles
"may be identified... as a a screened immunization schedule may be identified, whether or not
higher risk screened immunization which is associated with a that identification is actually
schedule with regard to the numerically higher rate of a made, as a screened immunization
risk of developing said chronic chronic immune-mediated disorder(s) schedule which causes an
immune mediated disorder(s)"18 being compared which increased net risk of acquiring
someone may or could interpret all the chronic immune-mediated
as a real risk (regardless of disorders compared, such conclusion
whether there is a statistically based upon the appropriate
significant difference) application of sound and recognized
scientific and statistical
principles
Classen asserts that no construction is required and the plain and ordinary meaning suffices. See ECF No. 219 at 28. As the parties' proposed constructions illustrate, there is significant ambiguity in the terms about what that process of identification requires. Accordingly, construction is required. See U.S. Surgical Corp., 103 F.3d at 1568.
There are three main areas of disputes in the parties' construction of these related terms: (1) statistical principles, (2), causation, and (3) risk.
i. Statistical Principles
Classen asserts that the risk should be evaluated based on numerical difference,19 not statistical significance. ECF No. 219 at 28-34. It bases this argument on the "practice of medicine" and notes that "[n]othing in the specification or the prosecution file history contradicts that." ECF No. 219 at 29. The defendants contend the specification reveals that statistical principles are to be used. E.g., ECF No. 221 at 20-21.
The defendants are correct that the specification reveals significant reliance on statistical principles. For example:
• "In a preferred embodiment the size of the groups should allow determination of statistical significance during an acceptable period of time. Any statistical method that is deemed appropriate for the trial design by one skilled in the art may be acceptable." '139 patent, col. 29, ll.62-64 (emphasis added).
• "Given the desired change in incidence of disease one hopes to be able to detect, and the statistical test one is employing, one can determine the size of a population needed for the (sic) at least one treatment group and the one or more control groups to demonstrate statistical significance (p < or =0.05). '139 patent, col. 30, ll.2-7 (emphasis added).
• "The size of a group needed to determine if [a] dosing schedule provides protection against at least one infectious agent is generally smaller than that needed to detect an effect on reducing a chronic immune mediated disorder because the incidence of the former diseases are generally higher than the later diseases and the former may occur earlier in life than the later. If the end point of the study is the development of protective or neutralizing antibodies two hundred mammals or less may be sufficient. The trial preferably will utilize any statistical method that is acceptable and is congruent with the study design." '139 patent, col. 32, ll.19-29 (emphasis added).
• "At 16 weeks of age 54% of the untreated rats had developed diabetes and[/]or died compared to 20% in the vaccinated group. At 20 weeks of age 54% of the untreated rats had died compared to 25% in the vaccinated group. At 32 weeks the results were 54% versus 35% respective... which represents a 34% reduction in the incidence of diabetes. The difference between the two groups were statistically significant at 20 weeks (P=0.027). '139 patent, col. 41, ll.6-14 (emphasis added).
• "The data in Table I indicates that administration of vaccines after two months increases the incidence of diabetes while administration of vaccines at birth can prevent diabetes. The findings are highly statistically significant." '139 patent, col. 42, ll.47-50 (emphasis added).
In contrast, the specification nowhere mentions "numerical difference," the construction sought by Classen. Cf. ECF No. 219 at 29 ("Nothing in the specification or the prosecution file history contradicts" Classen's proposed construction).
Even Bert Spilker's, A Guide to Clinical Trials (1991), on which Classen relies, supports the defendants' construction over Classen's. Spilker describes "Number Needed To Be Treated," on which Classen heavily relies as:
Mathematically, the number of patients who must be treated to prevent one major adverse event is the reciprocal of the absolute risk reduction.[20] This number has a readily understood meaning to physicians and has numerous statistical advantages over the other expressions described above .... For example, for every seven patients treated with medicine X[,] one fewer patient will have a stroke.
ECF No. 221-3 at 47. Spilker's focus in describing this way to portray the information is "in a way that practicing physicians can easily understand." Id. That does not necessarily mean, that statistical principles do not underlie the analysis. Further, Spilker specifically states that Number Needed To Be Treated, as an expression, "has numerous statistical advantages." Id. Clearly, Spilker did not comprehend this method to be the renunciation of statistics that Classen appears to contemplate. See ECF No. 219 at 32. Given the lack of evidence supporting Classen's contention that only numerical difference is required, the specification is clear that use of statistical principles is required. The "scientific" principles to which the defendants refer are unclear, as is the "sound and recognized" modifier. The requirement of statistical analysis from the specification is sufficiently specific, without the "sound" or "scientific" modifiers.
The Court is mindful that it should not "import[] limitations from the specification into the claim." Phillips, 415 F.3d at 1323. Because "understanding how a person of ordinary skill in the art would understand the claim terms" is the Court's focus, id., these passages of the specification inform interpretation of the claim terms. As Dr. Goodman has indicated, statistical principles are necessary for interpretation even of a coin toss. If two coins — each with an equal chance of showing heads or tails — are tossed, after 10 tosses, there is an 82% chance of the number of heads of the two coins being different; for 100 tosses, the chance is 94.4%. See ECF No. 221-13 ¶ 5; Hr'g. Without an understanding of the statistical principles involved, a person with ordinary skill in the art would be unable to "asses[] the possible contribution of the role of chance." ECF No. 221-13 ¶ 5. Accordingly, rather than adding limitations, the specification reflects the meaning of the claims to a person with ordinary skill in the art. See Phillips, 415 F.3d at 1323.
Classen also asserts the doctrine of claim differentiation for the proposition that statistical principles are not required in these terms. ECF No. 219 at 32. "Under the doctrine of claim differentiation, dependent claims are presumed to be of narrower scope than the independent claims from which they depend." AK Steel Corp. v. Sollac & Ugine, 344 F.3d 1234, 1242 (Fed.Cir.2003). Claim 51 of the '139 patent is "[t]he method of claim 20[21] where there is a statistically significant difference in the incidence of diabetes between the first and second groups or between a group of said subjects and a control group."
Claim 51 is clear that "a statistically significant difference is required." Statistical significance is a particular finding, unlike the mere application of statistical principles. See ECF No. 221-13 at 15 ("Assessing the role of chance does not absolutely require a threshold of statistical significance, but it does require some threshold for rejecting chance."). Accordingly, the presumption of claim differentiation is inapplicable.
ii. Causation
Despite their divergent proposed constructions — and their apparent belief as evidenced in the briefing — the parties actually agree that the possibility — as opposed to a requirement — of causation is required.22 The specification — and Dr. Classen's declaration from earlier in this case — confirm that the possibility of causation is intended:
• "The data presented in the present specification shows that such an immunization schedule can cause or at least substantially contribute to the develop of chronic immune mediated disorders ..." '139 patent, col. 4, ll.19-23 (emphasis added).
• "The present invention relates to the discovery that when one or more immunogens... is first administered at an early age ... it can substantially decrease the incidence, frequency, prevalence or severity of, or prevent, at least one chronic immune mediated disorder ...." '139 patent, col. 7, ll.35-40 (emphasis added).
• "[E]arly administration of immunogens can cause the release of lymphokines that may accelerate the maturation of the immune system in a manner which reduces the likelihood of development of a chronic immune mediated disorder." '139 patent, col. 7, ll.49-53.
• "In contrast, the late administration of an immunogen can cause the release of lymphokines which may act as grow factors enabling autoimmune inducing cells to grow." '139 patent, col. 8, ll.4-6 (emphasis added).
• "The immunization schedules of the present invention induce an immune response in the subject sufficient to reduce at least one measure selected from the group consisting of incidence, prevalence, frequency at severity of at least one chronic immune mediated disorder ...." '139 patent, col. 11, ll.36-40.
• "Comparison of data from the one or more control groups to data from the (sic) at least one treatment group may be performed to determine if the treatment schedule can modulate at least one measure in at least one chronic immune mediated disorder." '139 patent, col. 29, ll.55-59.
• "The patent claims pertain to `risk evaluation' which is the possibility of causation not proof of causation." ECF No. 66 at 48 (Dr. Classen's declaration in support of opposition to motion for summary judgment) (emphasis in original).
Nevertheless, the parties' proposed constructions do not adequately encompass the possibility of causation. Classen seeks construction of the claim terms to include "association," which it defines as "the connection or relationship between ideas, concepts or physical things."23 ECF No. 220 at 16. Although a possible causal link is clearly an "association," that word does not connote the specificity necessary to fulfill the purposes of claim construction.24 See U.S. Surgical, 103 F.3d at 1568.
The defendants' proposed use of "causation" is similarly problematic. Although one could read the entire proposed construction as applying "may be identified" to mean that causation is not actually required, that is not the natural reading and would likely not convey to the jury the appropriate meaning. Because neither of the parties' proposed constructions is adequate, the Court will adopt a construction including the phrase "possible causation."
iii. Risk
The parties also propose divergent adjectives for describing "risk" as used in the claim terms. Classen proposes using "real risk," while the defendants propose "net risk." Neither of these terms is contained within the intrinsic evidence.
Classen's conception of "real risk" is unclear, but Holohan implies that it does not require statistical significance.25 See ECF No. 219-5 at 9, 14, 23. "[I]t is something that may determine that you would choose or not choose a particular intervention. And what I'm talking about in terms of someone with skill in the art being able or could interpret as a real risk, it's in the eye of the beholder. Not every clinician would agree on the number of untoward events that would require them to change their practice." ECF No. 23-2 at 26-27, Tr. 124:21-125:5. The ambiguity of this term counsels against its use in the construction.
The defendants seek a construction including "net risk." They contend that a single risk must be considered with regard to all the disorders being screened in the schedules based upon the claim language — "said chronic immune mediated disorder(s)." ECF No. 221 at 17.
The defendants are correct that a single comprehensive risk for assessing all the screened disorders is necessary. As the parties note, the harms caused by some chronic immune mediated disorders — e.g., schizophrenia, or diabetes — are far greater than others — such as hay fever. See ECF Nos. 219 at 35, 221 at 17. The defendants' language of "net risk," however, does not indicate how the comparison is to be made, nor does it indicate how — if at all — the different chronic immune mediated disorders are to be weighed. "Net" is often used to mean some mathematical subtraction has been undertaken, but can also mean "balanced, final, [or] conclusive." See Oxford English Dictionary, net, adj. (3d ed., 2003). As either connotation is reasonable in this context, "net risk" only adds an additional word without diminishing the ambiguity.
Additionally, the defendants rely on Goodman's declaration that "a person of ordinary skill would have understood the term to require evaluation of the net risk of acquiring all the chronic immune-mediated disorders being compared." ECF No. 221-13 ¶ 8; see ECF No. 221 at 17. Accordingly, the word "all" in their proposed construction is superfluous. The definite article "the" already refers to the chronic immune mediated disorders being screened — whether there is one or multiple disorders being screened. Use of "net risk" and "all" does nothing to assist in the construction of the terms, and they will not be used.
Claim Language Court's Construction
"may be identified as a lower risk screened immunization may be identified, whether or not that identification
schedule ... with the risk of developing is actually made, as a screened immunization
said chronic immune mediated disorder(s)" schedule which possibly causes a decreased risk of
acquiring the chronic immune mediated disorder(s)
being compared, such conclusion based upon the
application of statistical principles
"may be identified ... as a higher risk screened may be identified, whether or not that identification
imnmnization schedule with regard to the risk of is actually made, as a screened immunization
developing said chronic immune mediated disorder(s)" schedule that possibly causes an increased risk of
acquiring the chronic immune mediated disorder(s)
being compared, such conclusion based upon the
application of statistical principles
b. Term 3
Claim Language Classen's Proposed Construction The Defendants' Proposed
Construction
"evaluating the association between evaluating the correlation between evaluating the causal relationship,
said immunization schedule the immunization schedule which is based upon the
and one or more chronic immune and one or more chronic immune appropriate application of sound
mediated disorders"26 mediated disorders and recognized scientific and
statistical principles, between
said immunization schedule and
one or more chronic immune mediated
disorders
For this term, the parties rely on their arguments about whether a causal relationship is required. ECF Nos. 219 at 39-40, 221 at 27-28. As discussed above, a possible causal relationship is the appropriate standard for the evaluation, and the use of statistical principles is required in the construction. See supra.
Claim Language Court's Construction
"evaluating the association between said immunization evaluating the possible causal relationship, which is
schedule and one or more chronic immune based upon the application of statistical principles,
mediated disorders" between said immunization schedule and one or
more chronic immune-mediated disorders
c. Term 4
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"comparing the incidence, prevalence comparing the incidence, prevalence comparing the incidence, prevalence
or frequency of a chronic or frequency of the chronic or frequency of all the
immune mediated disorder in a immune-mediated disorder(s) being chronic immune-mediated disorders
group ... to that in a control evaluated in a first group relative being evaluated in a first
group"27 to the incidence, prevalence group relative to the incidence
or frequency of the same chronic prevalence or frequency of the
immune-mediated disorders in a same one or more chronic immune-mediated
control group disorders in a
control group
The parties generally agree on the construction of this term but dispute whether the comparison is of "all" the chronic immune mediated disorders being screened or only a single one. See ECF Nos. 219 at 42, 221 at 10. Related to this dispute is Classen's attempt to change the agreed construction for Term 18. See infra.
The dispute of "all" arises from the inartfully drafted claim itself. Although part of disputed Term 3, rather than Term 4, step (I) of Claim 109 is "evaluating the association between said immunization schedule and one or more chronic immune mediated disorders by:." '739 patent col. 61, ll.41-42. This is immediately followed by substep (a), which includes Term 4: "comparing the incidence, prevalence or frequency of a chronic immune mediated disorder." '739 patent col. 61, ll.44-45. This is followed by the alternative substep (b), Term 5, infra: "comparing the risk of said chronic immune mediated disorder." '739 patent col. 61, ll.51-53. Because of this ambiguity, construction is necessary. Classen seeks to remedy the ambiguity by requesting "disorder(s)" in this term. The defendants seek to impose a requirement of "all" disorders.
The problem with the defendants' proposed construction is that it is internally inconsistent. It is not clear why the word "all" is used at the beginning of the term — for the first group — but "one or more" appears at the end — for the control group. In light of the Court's rejection of "all" in Terms 1 and 2, see supra, use of "all" could confuse the jury when only one chronic immune mediated disorder is being compared between the schedules. Use of "all" is inappropriate.
Nevertheless, the plain and ordinary meaning of this term will not suffice. Step I (Term 3) clearly provides for comparison of "one or more chronic immune mediated disorders," see '739 patent col. 61, ll.41-43, and substeps (a) (Term 4) and (b) (Term 5) are alternative parts of the method, see '739 patent col. 61, ll.44-53. In light of the specification's summary that the invention discovers "decreas[ing] the incidence, frequency, prevalence or severity of, or prevent, at least one chronic immune mediated disorder," '739 patent, col. 7, ll.41-44, and the other independent claims in the '739 patent referring to chronic immune mediated disorder(s), see, '739 patent col. 52, l.47, col. 62, l.36, the best reading of this claim is that at least one disorder is contemplated. Accordingly, the Court will adopt Classen's proposed construction, with all references to "disorder" as "disorder(s)."
Claim Language Court's Construction
"comparing the incidence, prevalence or frequency comparing the incidence, prevalence or frequency
of a chronic immune mediated disorder in a of the chronic immune-mediated disorder(s) being
group ... to that in a control group" evaluated in a first group relative to the incidence,
prevalence or frequency of the same chronic immune-mediated
disorder(s) in a control group
d. Term 5
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"comparing the risk of said comparing the numerical rate(s) comparing the risk of acquiring
chronic immune mediated disorder of occurrence of the same chronic all the same chronic immune-mediated
associated between two or immune mediated disorder in two disorders being evaluated
more immunization schedules"28 or more immunization schedules which are caused by immunizations
schedules, such conclusion
based upon the appropriate application
of sound and recognized
scientific and statistical
principles
The parties' arguments for this term are substantially the same as for Terms 1 and 2. See ECF Nos. 219 at 43, 221 at 27. Accordingly, the Court will construe the terms using similar language of causation and statistical principles.
Claim Language Court's Construction
"comparing the risk of said chronic immune mediated comparing the risk of acquiring the same chronic
disorder associated between two or more immune-mediated disorder(s) being evaluated
immunization schedules" which are possibly caused by immunizations schedules,
such conclusion based upon the application of
statistical principles
e. Term 6
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"safe immunization ... reflective an immunization schedule which immunization which causes a decreased
of the analysis from I"29 the immunizer believes is associated net risk of acquiring all
with an acceptable risk of the chronic immune-mediated
inducing the chronic immune-mediated disorders evaluated in (I), such
disorder conclusion based upon the appropriate
application of sound
and recognized scientific and
statistical principles
The parties' arguments are largely the same as those for Terms 1 and 2. See ECF Nos. 219 at 44-45, 221 at 29. Here, Classen introduces the term "acceptable risk" without providing any evidence in support.30 Because the language of risk appropriately describes the analysis to be undertaken, the Court will construe this term as in Terms 1 and 2. See supra.
Claim Language Court's Construction
"safe immunization... reflective of the analysis immunization which possibly causes a decreased
from I" risk of acquiring the chronic immune-mediated disorders
evaluated in (I), such conclusion based upon
the application of statistical principles
f. Term 7
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"comparing the incidence, prevalence Comparing the relative incidence, comparing the incidence, prevalence
or frequency of at least one prevalence or frequency of or frequency of one or
chronic immune-mediated disorder the same one or more chronic more chronic immune-mediated
in said first and second immune-mediated disorders between disorders in a first group relative
groups"31 said first and second to the incidence, prevalence or
group frequency of the same one or
more chronic immune-mediated
disorders in a second group
The parties' constructions for this term are fairly similar. To the extent a construction is required, Classen asserts that its "proposal is simpler, less confusing, and more closely aligned with the original claim language, and is thus more readily understood." ECF No. 219 at 46. The defendants contend that Classen's proposal introduces "a new concept which has no place in the claim: relative risk,"32 and argue that their construction "identifies with precision what must be compared." ECF No. 221 at 31.
A construction is required for this term because the claim language could be construed as separate comparisons within the groups — not between them. Although the Court — unlike the defendants — does not read "relative risk" in Classen's proposal, the placement of "relative" within the proposed construction does create the new term of "relative incidence, prevalence or frequency," which is undefined and ambiguous. Accordingly, the Court will use the defendants' construction.
Claim Language Court's Construction
"comparing the incidence, prevalence or frequency comparing the incidence, prevalence or frequency
of at least one chronic immune-mediated disorder of one or more chronic immune-mediated disorders
in said first and second groups" in a first group relative to the incidence, prevalence
or frequency of the same one or more chronic
immune-mediated disorders in a second group
g. Terms 8 and 9
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"lower risk screened immunization a screened immunization schedule screened immunization schedule
schedule... with regard to which is associated with a which causes a decreased net
the incidence or severity of said lower numerical rate of cases or risk of incidence or severity of
chronic immune mediated disorder(s)"33 a lower numerical rate of severe all the chronic immune-mediated
cases of the chronic immune-mediated disorders being compared, such
disorder(s) being compared conclusion based upon the appropriate
application of sound
and recognized scientific and
statistical principles
"higher risk screened immunization a screened immunization schedule screened immunization schedule
schedule with regard to the which is associated with a which causes an increased net
incidence or severity of said higher numerical rate of cases or risk of incidence or severity of
chronic immune mediated disorder(s)"34 a higher numerical rate of more all the chronic immune-mediated
severe cases of the chronic immune-mediated disorders being compared, such
disorder(s) being conclusion based upon the appropriate
compared application of sound
and recognized scientific and
statistical principles
The parties' arguments for these terms are the same as those for Terms 1 and 2. See ECF Nos. 219 at 47-50, 221 at 221 at 15-26. Accordingly, the Court's analysis above on causation, risk, and statistical principles will be applied to these terms.
Claim Language Court's Construction
"lower risk screened immunization schedule ... a screened immunization schedule which possibly
with regard to the incidence or severity of said causes a decreased risk of incidence or severity of
chronic immune mediated disorder(s)" the chronic immune-mediated disorder(s) being
compared, such conclusion based upon the application
of statistical principles
"higher risk screened immunization schedule with a screened immunization schedule which possibly
regard to the incidence or severity of said chronic causes an increased risk of incidence or severity of
immune mediated disorder(s)" the chronic immune-mediated disorder(s) being
compared, such conclusion based upon the application
of statistical principles
h. Term 10
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"considering the association between considering the correlation between considering the causal relationship,
said immunization schedule the immunization schedule which is based upon the
and one or more chronic immune and one or more chronic immune appropriate application of sound
mediated disorders"35 mediated disorders and recognized scientific and
statistical principles, between
said immunization schedule and
one or more chronic immune-mediated
disorders
With the substitution of "considering" for "evaluating" this term is the same as Term 3, supra. Accordingly, the parties rely on the same arguments. See ECF Nos. 219 at 50, 221 at 28. The Court will construe this term as with Term 3.
Claim Language Court's Construction
"considering the association between said immunization considering the possible causal relationship, which
schedule and one or more chronic immune is based upon the application of statistical principles,
mediated disorders" between said immunization schedule and one
or more chronic immune-mediated disorders
i. Term 11
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"considering the risk of said considering the numerical considering the risk of all the
chronic immune mediated disorder rate(s) of a chronic immune mediated chronic immune-mediated disorders
associated with said immunization disorder associated with caused by the immunizations
schedule relative to at an immunization schedule, relative schedule, such conclusion
least one other immunization to the numerical rate(s) of being based upon the appropriate
schedule"36 occurrence of the same chronic application of sound and recognized
immune-mediated disorder associated scientific and statistical
with at least one other immunization principles, relative to the risk of
schedule the same one or more chronic
immune-mediated disorders
caused by at least one other immunization,
such conclusion being
based upon the appropriate
application of sound and recognized
scientific and statistical
principles
The parties' arguments for this term concern the same "all," causation, and statistical principles issues as in Terms 1 and 2. See ECF Nos. 219 at 53-54, 221 at 27. Accordingly, the Court will construe this term in accordance with the analysis above.
Claim Language Court's Construction
"considering the risk of said chronic immune considering the risk of the chronic immune-mediated
mediated disorder associated with said immunization disorder(s) possibly caused by the immunizations
schedule relative to at least one other immunization schedule, such conclusion being based upon
schedule" the application of statistical principles, relative to
the risk of the same one or more chronic immune-mediated
disorders possibly caused by at least one
other immunization, such conclusion being based
upon the application of statistical principles
j. Term 12
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"identifying at least one human identifying at least one human identifying at least one human
subject who would be expected to subject who the immunizer expects subject whom a practitioner
be immunized safely with said to have an acceptable risk would reasonably expect, based
one or more immunogens according of developing a vaccine induced on the causal relationship concluded
to said immunization chronic immune-mediated disorder in (I), to have a decreased
schedule reflective of the analysis if said human subject were net risk of acquiring all the
from (I)"37 immunized with one or more immunogens chronic immune mediated disorders
according to one of considered in (I) if said human
said schedules based upon the subject is immunized with
analysis in part (I) said one or more immunogens
The parties' arguments for their proposed constructions are based upon those for Terms 1, 2, and 6. See ECF Nos. 219 at 54-55, 221 at 29. The Court will construe this term accordingly.
Claim Language Court's Construction
"identifying at least one human subject who would identifying at least one human subject whom a
be expected to be immunized safely with said one practitioner would reasonably expect, based on the
or more immunogens according to said immunization possible causal relationship concluded in (I), to
schedule reflective of the analysis from (I)" have a decreased risk of acquiring the chronic
immune mediated disorder(s) considered in (I) if
said human subject is immunized with said one or
more immunogens
k. Term 13
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"immunizing said subject"38 No construction required — plain Immunizing said subject after
and ordinary meaning said screening
Classen asserts that this term is clear and there is no reason for the defendants' additional language. ECF No. 219 at 56. The defendants contend that the claim language and specification are clear that immunization must occur after screening. ECF No. 221 at 32-34.
"As a general rule the claim is not limited to performance of the steps in the order recited, unless the claim explicitly or implicitly requires a specific order." Baldwin Graphic Sys., Inc. v. Siebert, Inc., 512 F.3d 1338, 1345 (Fed.Cir.2008). Each of the Claims containing this term has the same structure: Step I contains screening and Step II addresses immunizing. See '139 patent claims 1, 63, 65; '739 patent claims 1, 71, 96. As a general matter it is logical that immunization would occur after screening. Viewed in the context of the structure alone, it is not certain that screening must happen first: one could immunize and then screen to see if the immunization was proper.
However, the language of Step II implicitly requires that the screening must occur first. Each limitation contains at least one reference to "screened immunization schedule." See '139 patent Claim 1 col. 53, ll.18, 22; Claim 63 col. 58, ll.16-17; Claim 65 col. 59, ll.3, 5; '739 patent Claim 1 col. 52 l.57; Claim 71 col. 57, l.5, 9-10; Claim 96 col. 59, l.27, 31-32. The use of the past participle "screened" requires that the screening already has been done at the time of immunization. See Tuna Processors, Inc. v. Hawaii Int'l Seafood, Inc., 327 Fed.Appx. 204, 209-210 (Fed.Cir.2009). Accordingly, to clarify that the steps must be performed in order, the Court will adopt the defendants' proposed construction.
Claim Language Court's Construction
"immunizing said subject" immunizing said subject after said screening
l. Term 14
Claim Language Classen's Proposed The Defendants' Proposed
Construction Construction
"immunizing said humans ... No construction required — plain immunizing said human by a
by a method identified in (I)"39 and ordinary meaning method already having been
identified in (I)
The dispute over this term is similar to Term 13. See ECF Nos. 219 at 56-57, 221 at 33. However, the analysis for Term 13 does not directly apply here: the step containing the term contains no past participle; it reads in full "immunizing said human against one or more infectious disease by a method identified in (I)." '790 patent col. 51, ll.46-47.
Nevertheless, this step requires that Step I be undertaken first. One cannot logically use an identified method if that method has not yet been performed. See Rambus Inc. v. Rea, 527 Fed.Appx. 902, 910 (Fed.Cir.2013) ("It would make no sense for the second step to be performed first — telling the memory device to begin sampling write data — before the memory device was even instructed to perform a `write' operation."). Accordingly, the defendants are correct that the method of Step I must have already been performed.
Nevertheless, in this case, no construction is necessary because the term itself is clear. As discussed, it would be illogical to use the method for immunization before performing it. This would be clear to a jury hearing the term. Accordingly, the Court will not adopt a construction for this term, and rely on the plain and ordinary meaning.
Claim Language Court's Construction
"immunizing said humans ... by a method, identified Plain and ordinary meaning
in (I)"
m. Term 15
Claim Language Classen's Proposed The Defendants' The Defendants'
Construction Proposed Hybrid
Construction Construction
"chronic immune-mediated a disorder which is slow disorder(s) in which the Disorder(s) which result
disorder"40 to develop, is persistent immune system is involved from, the abnormal function
and with some diseases in the pathogenesis, of the immune system,
is recurring, and results which last longer which last(s) longer
from the abnormal functioning than two months, and than two months, and
of the body's immune do(es) not include (a) do(es) not include (a)
system, such as permanent sequela of permanent sequela of
when it overreacts to a acute immune response acute immune response
threat, or attacks the diseases, (b) diseases associated diseases, (b) diseases associated
body's own cells and with live viral with live viral
does not include (a) permanent infections, or (c) sequela infections, or (c) sequela
sequela of acute caused by chronic infections caused by chronic infections
immune response diseases,
(b) diseases associated
with live viral infections,
or (c) sequela
caused by chronic infections
The parties' proposed constructions of this term are quite similar. Classen asserts that the defendants' addition of the phrase "which lasts longer than two months" is unsupported. ECF No. 219 at 58. The defendants contend that the two-month limitation is from the specification. ECF No. 221 at 35. They have also added "the word `pathogenesis' which indicates that the disorder arises from the immune system, and reflects the meaning of `immune mediated' within this term." ECF No. 221 at 35. At the hearing, the defendants offered a hybrid construction using Classen's language of "abnormal function of the immune system" with which they do not disagree. Hr'g.
The specification defines "chronic immune mediated disorder" as
one which lasts longer than two months, but does not include permanent sequela of acute immune response disease such as seizures and anaphylaxis, nor do such disorders include disease associated with live virus infections as in subacute sclerosing panencephalitis induced by measles vaccine. Chronic immune mediated disorders does not include sequela caused by chronic infections by live vaccines.
'139 patent, col. 9, ll.44-51. The defendants have not provided any other evidence for this definition.41 The defendants assert that because Classen has defined this term, the Court should use Classen's definition. ECF No. 221 at 35.
The defendants misconstrue the doctrine. One of the two exceptions to the rule giving claim terms "their ordinary and customary meaning as understood by a person of ordinary skill in the art" is "when a patentee sets out a definition and acts as his own lexicographer." Thorner v. Sony Computer Entm't Am. LLC, 669 F.3d 1362, 1365 (Fed.Cir.2012). "To act as its own lexicographer, a patentee must clearly set forth a definition of the disputed claim term' other than its plain and ordinary meaning." Id. (quoting CCS Fitness, Inc. v. Brunswick Corp., 288 F.3d 1359, 1366 (Fed.Cir.2002)). The patentee "must clearly express" his intent to do so "in the written description." Helmsderfer v. Bobrick Washroom Equip., Inc., 527 F.3d 1379, 1381 (Fed.Cir.2008).
The defendants have not provided any evidence of the plain and ordinary meaning of this term. Similarly, there is no indication that the definition in the specification is an intended departure. Because the Court must not "import[] limitations from the specification into the claim," Phillips, 415 F.3d at 1323, and there is no other evidence for the two month limitation, the Court will not so construe this term. Because of the lack of evidence for construction of this term — and the parties agree about the majority of the construction — the Court will construe the term according to the defendants' hybrid proposal, with the exception of "two months."
Claim Language Court's Construction
"chronic immune-mediatad disorder" disorder(s) which result from the abnormal function
of the immune system and do(es) not include
(a) permanent sequela of acute immune response
diseases, (b) diseases associated with live viral
infections, or (c) sequela caused by chronic infections
3. Agreed Terms with Remaining Issues
Although the parties agreed on the constructions of a number of terms, Classen seeks to change three. See ECF No. 220 at 2-4, 6-8. Classen asserts that the requested changes are mere "clarification[s]" or fix "grammatical typo[s]." Id. at 2-3. The defendants dispute these characterizations and seek to hold Classen to their agreements. See id. at 8.
Because claim construction is a matter of law, the Court is not obligated to follow the parties' agreements. See Exxon Chem. Patents, Inc. v. Lubrizol Corp., 64 F.3d 1553, 1555 (Fed.Cir.1995) ("[T]he trial judge has an independent obligation to determine the meaning of the claims, notwithstanding the views asserted by the adversary parties."). "In exercising this obligation, district courts are not bound by the stipulation of parties concerning claim terms." Cross Atl. Capital Partners, Inc. v. Facebook, Inc., Civ. No. 07-2768, 2011 WL 941870, at *9 (E.D.Pa. Mar. 17, 2011) (collecting cases).42 Accordingly, Classen's agreement does not remove this Court's obligation to construe the claims.
a. Term 16
Claim Language Agreed Construction Classen's Proposed
Construction43
"infectious disease-causing organism any substance, derived from infectious any substance, derived from an
associated immunogens"44 disease-causing organisms, organism known to induce an
capable of inducing an immune infectious disease in said subject's
response species disease causing organisms,
capable of inducing an
immune response
The defendants assert that the specification supports the previously-agreed construction, and Classen should be held to its agreement. See ECF Nos. 220 at 6-7, 221 at 36. Classen asserts that "[i]t would be immaterial if the disease developed in spiders or birds, but not in mammals and humans. Since the claims are directed toward immunizing mammals and human beings, then the disease that is being immunized against must be present in mammals and human beings, not some foreign species," but does not provide any evidence to support this conclusion. See ECF No. 232 at 42.
The defendants are correct that the specification references cross-species immunization. In the examples, mice were given "commonly available human vaccines." '139 patent, col. 36, ll.12; col. 38-41. However, there is no indication whether the mice could actually contract the human diseases against which they were being vaccinated. Classen's concern about "spiders or birds" is overblown, as the inventions all speak solely to mammals. Viewed in this context, the agreed construction is appropriate, as there is no evidence justifying limiting the term to a single species.
Claim Language Court's Construction
"infectious disease-causing organism associated any substance, derived from infectious disease-causing
immunogens" organisms, capable of inducing an immune
response
b. Term 18
Claim Language Agreed Construction Classen's Proposed
Construction45
"considering the incidence, prevalence considering the incidence, prevalence considering the incidence, prevalence
or frequency of a chronic or frequency of all the or frequency of all one or
immune mediated disorder in a chronic immune mediated disorders more of the chronic immune mediated
first group...relative to that in in one group relative to the disorders in one group relative
at least one other group"46 incidence, prevalence or frequency to the incidence, prevalence
of the same one or more or frequency of the same one or
chronic immune-mediated disorders more chronic immune-mediated
in at least one other group disorders in at least one other
group
Classen asserts that its proposed change is merely typographical, which the defendants dispute. See ECF No. 220 at 3,7-8. This term — and the dispute over the construction — is very similar to the disputed Term 4. Although the defendants are correct that this is a substantive issue, the Court must resolve the dispute as a matter of law. See Exxon Chem. Patents, 64 F.3d at 1555; Cross Atl. Capital Partners, 2011 WL 941870, at *9.
Much like the Claim in Term 4, this term is a substep of the claim. Although the term limitation states "a chronic immune mediated disorder," earlier in the step the limitation has "one or more chronic immune mediated disorders." '790 patent, col. 51, ll.29-31. As with Term 4, the logical reading is carrying forward the "one or more"; the Court will construe the term accordingly.
Claim Language Court's Construction
"considering the incidence, prevalence or frequency considering the incidence, prevalence or frequency
of a chronic immune mediated disorder in a of the one or more of the chronic immune mediated
first group ... relative to that in at least one disorders in one group relative to the incidence,
other group" prevalence or frequency of the same one or more
chronic immune-mediated disorders in at least one
other group
c. Term 19
Claim Language Agreed Construction Classen's Proposed
Construction47
"immunogenic agent(s)"48 vaccine(s) which comprise(s) a vaccine(s) which comprise9s) a
pharmaceutically-acceptable pharmaceutically-acceptable
composition comprising at least composition comprising at least
one immugen in an amount such one immugen in an amount such
that, when administered according that, when administered according
to an immunization schedule, to an immunization schedule,
it contributes to a desired effect it contributes to a desired effect
against chronic immune-mediated against a chronic immune mediated
disorder disorder
Classen asserts that the "against a chronic immune-mediated disorder" language is erroneously part of the agreed construction, stating "[a]lthough Dr. Classen has recognized the interrelation between vaccines and chronic immune mediated disorders, this interrelation is not properly part of the definition of vaccine." ECF No. 220 at 4. The defendants assert no argument other than seeking to hold Classen to the agreement. See id. at 8.
Neither party has submitted any evidence for construction of this term. Stedman's Medical Dictionary gives "immunogenic" as a synonym for "antigenic," which it defines as "[h]aving the properties of an antigen." Stedman's Medical Dictionary, 108, 954 (28th ed. 2006). Antigen — a synonym of immunogen — is defined as:
Any substance that, as a result of coming in contact with appropriate cells, induces a state of sensitivity or immune responsiveness and that reacts in a demonstrable way with antibodies or immune cells of the sensitive subject in vivo or in vitro. Modern usage tends to retain the broad meaning of [antigen], employing the terms `antigenic determinant' or `determinant group' for the particular chemical group of a molecule that confers antigenic specificity."
Id. at 105; see id. at 954 ("immunogen"). Stedman's defines vaccine as:
Originally the live v. (vaccinia, cowpox) virus inoculated in the skin as prophylaxis against smallpox and obtained from the skin of calves inoculated with seed virus. Usage has extend the meaning to include essentially any preparation intended for active immunologic prophylaxis; e.g., preparations of killed microbes of virulent strains or living microbes of attenuated (variant or mutant) strains; or microbial, fungal, plant, protozoal, or metazoan derivatives or products.
Id. at 2081.
From these definitions, it is clear that the immunogens are generally administered through vaccines for the purposes of preventing diseases caused by virus or other microbes. Although preventing a chronic immune mediated disorder may also be a desired effect, it is clear that is not its only purpose.49 The formerly agreed construction incorrectly implies that the only desired effect is the prevention of chronic immune mediated disorders. Accordingly, the Court will adopt Classen's proposed construction.
Claim Language Court's Construction
"immunogenic agent(s)" vaccine(s) which comprise(s) a pharmaceutically-acceptable
composition comprising at least one immunogen
in an amount such that, when administered
according to an immunization schedule, it
contributes to a desired effect
4. Agreed Terms
The parties have agreed on constructions for several terms. ECF No. 220 at 50-51. The Court has reviewed these proposals and will adopt them with one exception.
The parties generally construe Term 21 "pediatric immunogen" and Term 22 "non-pediatric immunogen" in parallel, with the exception italicized:
Term 21: "pediatric immunogen"50 Term 22: "non-pediatric immunogen"51
immunogen that was routinely administered after immunogen not routinely administered to children
birth to children less than 16 weeks old in moderate prior to 16 weeks in modern developed nations of
developed nations of moderate latitude in 1992 moderate latitude in 1992
The discrepancy between these constructions is "moderate developed nations" in Term 21 and "modern developed nations" in Term 22. "Moderate developed nations" is ungrammatical and does not appear to be what the parties intended. A Google search of that phrase returned four results, all from the same blog. See https://www.google.com/search?q=% 22moderate+developed+nations% 22 (last accessed August 22, 2013). The specification states that "[d]eveloped countries have expensive water purification and sewer systems that reduce an infant's exposure to the pathogens" and "may include the United States, Canada and the European nations listed in the table pertaining to Example 101." '139 patent, col. 30, ll.10-12, 17-19. This indicates that "modern, not "moderate" is the appropriate word. Accordingly, the Court will use "modern developed nations" for both terms.
III. Constructions
The 26 terms as construed by the Court — including those agreed by the parties — are as follows:
Claim Language Patent Claims Court's Construction
1. "may be identified as a lower '139 patent, Claims 1(I(b)), may be identified, whether or not
risk screened immunization 63(I(b)), 65(I(b)); '739 patent, that identification is actually
schedule ... with regard to the Claims 1(I(b)), 71(I(b)), 96(I(b)). made, as a screened immunization
risk of developing said chronic schedule which possibly
immune mediated disorder(s)" causes a decreased risk of acquiring
the chronic immune mediated
disorder(s) being compared, such
conclusion based upon the application
of statistical principles
2. "may be identified ... as a '139 patent, Claims 1(I(b)), may be identified, whether or not
higher risk screened immunization 63(I(b)), 65(I(b)); '739 patent, that identification is actually
schedule with regard to the Claims 1(I(b)), 71(I(b)), 96(I(b)). made, as a screened immunization
of developing said chronic schedule that possibly causes
immune mediated disorder(s)" an increased risk of acquiring the
chronic immune mediated disorders)
being compared, such conclusion
based upon the application
of statistical principles
3. "evaluating the association between '739 patent, Claim 109(I). evaluating the possible causal relationship,
said immunization schedule which is based upon
and one or more chronic immune the application of statistical principles,
mediated disorders" between said immunization
schedule and one or more
chronic immune-mediated disorders
4. "comparing the incidence, '739 patent, Claim 109(I(a)). comparing the incidence, prevalence
prevalence or frequency of a or frequency of the chronic
chronic immune mediated disorder immune-mediated disorder(s) being
in a group ... to that in a evaluated in a first group relative
control group" to the incidence, prevalence
or frequency of the same chronic
immune-mediated disorder(s) in
a control group
5. "comparing the risk of said '739 patent, Claim 109(I(b)). comparing the risk of acquiring
chronic immune mediated disorder the same chronic immune-mediated
associated between two or disorder(s) being evaluated
more immunization schedules" which are possibly caused by immunizations
schedules, such conclusion
based upon the application
of statistical principles
6. "safe immunization ... reflective '739 patent, Claim 109(II). immunization which possibly
of the analysis from I" causes a decreased risk of acquiring
the chronic immune-mediated
disorders evaluated in (I), such
conclusion based upon the application
of statistical principles
7. "comparing the incidence, '739 patent, Claim 110(I(b)). comparing the incidence, prevalence
prevalence or frequency of at or frequency of one or
least one chronic immune-media more chronic immune-mediated
ted disorder in said first and disorders in a first group relative
second groups" to the incidence, prevalence or
frequency of the same one or
more chronic immune-mediated
disorders in a second group
8. "lower risk screened immunization '739 patent, Claim 110(I(b)). a screened immunization schedule
schedule ... with regard which possibly causes a decreased
to the incidence or severity of risk of incidence or se verity
said chronic immune mediated of the chronic immune-mediated
disorder(s)" disorder(s) being compared,
such conclusion based
upon the application of statistical
principles
9. "higher risk screened immunization '739 patent, Claim 110(I(b)). schedule which possibly causes
schedule with regard to an increased risk of incidence or
the incidence or severity of said severity of the chronic immune-mediated
chronic immune mediated disorder(s)" disorder(s) being compared,
such conclusion based
upon the application of statistical
principles
10. "considering the association '790 patent, Claim 1(I). considering the possible causal
between said immunization relationship, which is based upon
schedule and one or more chronic the application of statistical principles,
immune mediated disorders" between said immunization
schedule and one or more
chronic immune-mediated disorders
11. "considering the risk of said '790 patent, Claim 1(I(b). considering the risk of the chronic
chronic immune mediated disorder immune-mediated disorder(s)
associated with said immunization possibly caused by the immunizations
schedule relative to at schedule, such conclusion
least one other immunization being based upon the application
schedule" of statistical principles, relative
to the risk of the same one or
more chronic immune-mediated
disorders possibly caused by at
least one other immunization,
such conclusion being based upon
the application of statistical principles
12. "identifying at least one human '790 patent, Claim 1(II). identifying at least one human
subject who would be expected subject whom a practitioner
to be immunized safely would reasonably expect, based
with said one or more immunogens on the possible causal relationship
according to said immunization concluded in (I), to have a
schedule reflective of the decreased risk of acquiring the
analysis from (I)" chronic immune mediated disorder(s)
considered in (I) if said
human subject is immunized with
said one or more immunogens
13. "immunizing said subject" '139 patent, Claims 1(II), 63(II), immunizing said subject after
65(II); '739 patent, Claims 1(II), said screening
71(II), 96(II).
14. "immunizing said humans '790 patent, Claim 1(III). Plain and ordinary meaning
... by a method identified
in (I)"
15. "chronic immune-mediated '139 patent, Claims 1, 36, 37, 63, disorder(s) which result from the
disorder" 65; '739 patent, Claims 1, 2, 3, abnormal function of the immune
35, 42, 53, 66, 71, 72, 73, 96, 97, system and do(es) not include (a)
109, 110; '790 patent, Claims 1, permanent sequela of acute immune
2, 7, 10-19, 136-64, 191, 192, 196, response diseases, (b) diseases
199, 200, 205, 206. associated with live viral
infections, or (c) sequela caused
by chronic infections
16. "infectious disease-causing '139 patent, Claims 1, 63, 65; any substance, derived from infectious
organism associated immunogens" '739 patent, Claims 1, 71, 96, 110. disease-causing organisms,
capable of inducing an immune
response
17. "protecting against or inducing '139 patent, Claims 1(I(b)), Protecting against or inducing
a chronic immune-mediated 63(I(b)), 65(I(b)); '739 patent, the same one or more chronic
disorder in said first and said Claims 1(I(b)), 71(I(b)), 96(I(b)). immune-mediated disorders in
second groups" said first group and said second
group
18. "considering the incidence, '790 patent, Claim 1(I(a)). considering the incidence, prevalence
prevalence or frequency of a or frequency of the one or
chronic immune mediated disorder more of the chronic immune mediated
in a first group ... relative disorders in one group relative
to that in at least one other to the incidence, prevalence
group" or frequency of the same one or
more chronic immune-mediated
disorders in at least one other
group
19. "immunogenic agent(s)" '739 patent, Claims 21, 109. vaccine(s) which comprise(s) a
pharmaceutically-acceptable composition
comprising at least one
immunogen in an amount such
that, when administered according
to an immunization schedule,
it contributes to a desired effect
20. "immunogen(s)" '139 patent, Claims 26, 28; '739 Any substance(s) capable of inducing
patent, Claims 4-6, 8-12, 21, 25-27, an immune response
30, 34, 42, 45, 46, 55-58, 89-91,
97, 109, 110, 113; '790 patent,
Claims 1, 5, 6, 8, 20-29, 40-116,
165-169, 191, 192, 196, 199, 200,
205
21. "pediatric immunogen" '739 patent, Claims 21, 30, 45 immunogen that was routinely
administered after birth to children
less than 16 weeks old in
modern developed nations of
moderate latitude in 1992
22. "non-pediatric immunogen" '739 patent, Claims 21, 30, 45 immunogen not routinely administered
to children prior to 16
weeks in modern developed nations
of moderate latitude in 1992
23. "early immunogen" (`139 '139 patent, Claims 1, 3, 4, 63, 64, first dose of at least one infectious
patent)
65 disease-causing organism
associated immunogen, which is
given to both groups and is given
sooner after birth according to
one or more of the screened immunization
schedules than according
to one or more of the
other screened immunization
schedules, regardless of its time
of administration in the latter
schedule(s)
24. "early infectious disease-causing '139 patent, Claims 1, 63, 65 first dose of at least one infectious
organism associated immunogen" disease-causing organism
(`139 patent) associated immunogen, which is
given to both groups and is given
sooner after birth according to
one or more of the screened immunization
schedules than according
to one or more of the
other screened immunization
schedules, regardless of its time
of administration in the latter
schedule(s)
25. "early immunogen" ('739 '739 patent, Claims 71, 75, 78, 81, first dose of at least one infectious
patent) 82, 96 disease-causing organism
associated immunogen, which is
given to both groups and is given
sooner after birth according to
the first screened immunization
schedule than according to the
second schedule, regardless of its
time of administration in the second
group
26. "early infectious disease-causing '739 patent, Claims 71, 96 first dose of at least one infectious
organism-associated immunogens" disease-causing organism
(`739 patent) associated immunogen, which is
given to both groups and is given
sooner after birth according to
the first screened immunization
schedule than according to the
second schedule, regardless of its
time of administration in the second
group
